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Zoho Payroll Setup

Zoho Payroll is a cloud-based payroll management software tailored for Indian businesses to streamline employee salary processing, tax compliance, EPF/ESI, TDS, and more. A correct initial setup ensures hassle-free payroll processing, regulatory compliance, and seamless integration with HR and accounting functions

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Benefits of Zoho Payroll Setup

  • Error-Free Salary Processing: Automates payroll calculations, deductions, and statutory compliance.

  • Tax Compliant: Handles TDS, EPF, ESI, and PT with accurate deductions and reports.

  • Direct Bank Transfers: Integrated payment disbursals to employees’ bank accounts.

  • Employee Self-Service: Dedicated portal for payslips, tax declarations, and leave balances.

  • Integrated with Zoho Books: Seamless sync of payroll expenses to your accounting system.

Applicability

Zoho Payroll is ideal for:

  • Startups, SMEs, and Growing Companies

  • Organizations with 5 to 500+ employees

  • Businesses requiring EPF, ESI, and TDS compliance

  • Companies transitioning from manual payroll or spreadsheets

  • HR teams needing automated leave and reimbursement tracking

Process

  • Initial Consultation & Needs Assessment
    Understand company size, salary structure, compliance requirements, and existing HR systems.

  • Company Profile Setup
    Create Zoho Payroll account, define branches, departments, and compliance jurisdictions.

  • Salary Components & Policies Configuration
    Setup of salary structures (CTC, earnings, deductions), leave policies, reimbursement rules.

  • Employee Data Import
    Import employee master data, PAN, Aadhaar, bank details, and joining dates.

  • Compliance Setup
    Configure EPF, ESI, TDS, and Professional Tax settings based on applicable state laws.

  • Payslip and Report Templates
    Customize payslip formats and automate generation of payroll reports.

  • Training & Go-Live
    Conduct training sessions for HR/payroll teams and provide post-go-live support.

Documents Required

  • Company PAN, TAN, and GSTIN

  • EPFO, ESIC, and Professional Tax registration details

  • Employee master data (Name, PAN, Aadhaar, contact, salary details)

  • Existing salary structure or Excel-based payroll data

  • Bank account details for salary disbursement

What You’ll Get

  • Fully customized and compliant Zoho Payroll account

  • Salary structure setup and automated monthly payroll run

  • Statutory report generation for EPF, ESI, TDS, PT

  • Employee self-service portal access

  • Training & post-setup support for your HR team

Frequently Asked Questions

Have a look at the answers to the most asked questions

Yes, it automates statutory calculations and generates required challans and reports.

Absolutely. It works efficiently for businesses with as few as 5 employees.

Yes, we help with complete data migration, validation, and reconciliation.

Yes, it integrates seamlessly for unified accounting and HR workflows.

Setup typically takes 5–10 business days depending on complexity and data availability.

What clients say

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